PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK28411.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family AP2
Protein Properties Length: 360aa    MW: 40824.1 Da    PI: 7.784
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK28411.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.14e-17104153155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  KFK28411.1 104 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 153
                 78*******************......55************************997 PP

2AP241.53.4e-13196246155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV+ +k  grW+A++  +     +k+++lg f+t+ eAa+ +++a+ k +g
  KFK28411.1 196 SKYRGVTLHK-CGRWEARLGQF--L-GKKYVYLGLFDTEIEAARSYDKAAIKCNG 246
                 89********.7******5553..1.26**********99**********99776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.99E-16104162IPR016177DNA-binding domain
PfamPF008473.7E-9104153IPR001471AP2/ERF domain
CDDcd000185.21E-11105162No hitNo description
Gene3DG3DSA:3.30.730.103.2E-17105161IPR001471AP2/ERF domain
SMARTSM003806.8E-32105167IPR001471AP2/ERF domain
PROSITE profilePS5103217.899105161IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-16196255IPR016177DNA-binding domain
PfamPF008478.8E-9196246IPR001471AP2/ERF domain
CDDcd000181.29E-23196254No hitNo description
Gene3DG3DSA:3.30.730.101.9E-15197254IPR001471AP2/ERF domain
SMARTSM003807.0E-30197260IPR001471AP2/ERF domain
PROSITE profilePS5103215.369197254IPR001471AP2/ERF domain
PRINTSPR003672.4E-5198209IPR001471AP2/ERF domain
PRINTSPR003672.4E-5236256IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MWNLNDSPDH HEGTDGRGNR VGHVSSSMNQ FTTWRLSVPP VTRNFFPGQN MEPEVQETYG  60
TSFTRRQCVG HQSDPSGSGR PEEPEPEILP PVKKSRRGPR SRSSQYRGVT FYRRTGRWES  120
HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINF DVEDYVEDLK QMSNLTKEEF  180
MHILRRQSTG FPRGSSKYRG VTLHKCGRWE ARLGQFLGKK YVYLGLFDTE IEAARSYDKA  240
AIKCNGKDAV TNFDPKIYDE EFNPEQWNDH HLDLSLGESN SEEFGQKSEI GSIRTSIRDE  300
DKLLGSDLSL AMATTATVRS EKQSDGGGKR VGMAASSGFS PHHSPWNHHH NPHTFHFPRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010444685.10.0PREDICTED: AP2-like ethylene-responsive transcription factor TOE3 isoform X1
SwissprotQ9FH951e-179TOE3_ARATH; AP2-like ethylene-responsive transcription factor TOE3
TrEMBLA0A087GEV90.0A0A087GEV9_ARAAL; Uncharacterized protein
STRINGBra012139.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM22972875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67180.11e-164target of early activation tagged (EAT) 3